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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0476s00010.1 |
Common Name | LR48_Vigan09g050700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NAC |
Protein Properties |
Length: 306aa MW: 35433.3 Da PI: 8.7766 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0476s00010.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.8 | 2.6e-50 | 19 | 146 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
pGfrFhPtdeelv +yL++kve+k+l++ e ik+vdiyk++PwdLpk + ++kewyfF+ r +ky+++ r+nr+t+sg+Wkatg dk++++
Vang0476s00010.1 19 LPGFRFHPTDEELVGFYLQRKVEKKPLKI-ELIKQVDIYKYDPWDLPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYC 110
69***************************.89***************6666699**************************************9 PP
NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +glkk+Lv+y+g+a kg+ktdW+mhe+rl
Vang0476s00010.1 111 VkePHDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 146
7434445***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005992 | Biological Process | trehalose biosynthetic process |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006561 | Biological Process | proline biosynthetic process |
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
GO:0010120 | Biological Process | camalexin biosynthetic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MNAKVQDSDD TKKGEEVVLP GFRFHPTDEE LVGFYLQRKV EKKPLKIELI KQVDIYKYDP 60 WDLPKVNSFG DKEWYFFCIR GRKYRNSVRP NRVTRSGFWK ATGIDKSIYC VKEPHDCIGL 120 KKSLVYYRGS AGKGTKTDWM MHEFRLPPNA KSSANIANTT NNLHEAEVWT LCRIFKRIPS 180 FKKYSPNLKD TTALTKSNTV NSNTSTLDSE NCKPYLICRD PDMMQQLKPV FGQVDEKKHL 240 FLGQFGQLPH LQPPSTPYPT FWNHNVEDYA FANENWDDLR SVVQFAIDPS SVFDCTETHF 300 PPYFS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-47 | 20 | 183 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-47 | 20 | 183 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-47 | 20 | 183 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-47 | 20 | 183 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 8e-47 | 20 | 183 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 9e-47 | 20 | 183 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 9e-47 | 20 | 183 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
Publications
? help Back to Top |
- Yang K, et al.
Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024] - Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]
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