PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang03g14810.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 549aa    MW: 59895.8 Da    PI: 8.0039
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang03g14810.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.16.4e-32242299260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  Vang03g14810.1 242 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 299
                     8****************************************.***************85 PP
2WRKY105.82.3e-33365423159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+v+g+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+
  Vang03g14810.1 365 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHD 423
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.617236300IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-27236300IPR003657WRKY domain
SuperFamilySSF1182904.32E-25239300IPR003657WRKY domain
SMARTSM007744.1E-34241299IPR003657WRKY domain
PfamPF031061.6E-24242298IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-37350425IPR003657WRKY domain
SuperFamilySSF1182902.09E-29357425IPR003657WRKY domain
PROSITE profilePS5081138.664360425IPR003657WRKY domain
SMARTSM007743.5E-39365424IPR003657WRKY domain
PfamPF031064.1E-26366423IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
LPPFPSSLTQ PFYFCSSKIP TFFLCTVMDA AEALSDDPNR PGSRPNSAPD AAPAGGGARY  60
KLMSPAKLPI SRSPCVTIPP GLSPTSFLES PVLLSNMKVE PSPTTGSLFM LHQTAHASVT  120
SAASASFPVT TASFNTNTID DRKPSFFEFK PHSRPNMVPA DPNNHASEKS TQIDEGKTQP  180
FDSSPLVKSE IVVPSNELSL SSPVQGDLDE LNPRSNIANG LHASNIDNKA SGLSVAADRV  240
SDDGYNWRKY GQKHVKGSEF PRSYYKCTHP NCEVKKLFER SHDGQITEII YKGTHDHPKP  300
QPSRRYSSGT IMTMQEERSD KASFRDEVFL LSRKMELANA DITPVVKPIR EPRVVVQTLS  360
EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTNTGCPVRK HVERASHDPK AVITTYEGKH  420
NHDVPTARNN SCHEIAGSAS AASGQTRIRP EESDTISLDL GMGISPASEN TPNSQGRMML  480
PEFGDSQAHT SNSNFKFVHT SGAPVYFGVL NNNSNPYGSR ENPSDSSTSL NHSAYPCPQN  540
VGRILMGP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-37242425877Probable WRKY transcription factor 4
2lex_A6e-37242425877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang03g14810.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017408797.10.0PREDICTED: probable WRKY transcription factor 20 isoform X1
RefseqXP_017408798.10.0PREDICTED: probable WRKY transcription factor 20 isoform X2
SwissprotQ93WV01e-165WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A0S3S6P70.0A0A0S3S6P7_PHAAN; Uncharacterized protein
STRINGXP_007146592.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-162WRKY family protein