PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 554aa MW: 60130.7 Da PI: 6.649

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang03g09900.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	71.8	1e-22	407	469	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L +eN +Lk+e+++l++ ++k++ e+ Vang03g09900.1 407 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDSLNSENGTLKSEINRLTESSEKMRVEN 469 89*********************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07777	2.7E-34	95	190	IPR012900	G-box binding protein, multifunctional mosaic region
Pfam	PF16596	8.7E-17	225	295	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.6E-16	401	466	No hit	No description
SMART	SM00338	2.9E-21	407	471	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.9E-20	407	469	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	13.185	409	472	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.88E-11	410	465	No hit	No description
CDD	cd14702	8.30E-22	412	460	No hit	No description
PROSITE pattern	PS00036	0	414	429	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence Send to blast
VDFAFALLPS LLVTTTIPHL CVKAHCCFPR FLERENAHSK LIVSPYLDPF FGYLELPGVF 60 SPCVFMVFLA RCFVGEDNIW PIGYLVSALY LECTMGNNEE EKSTKTEKPS SPATMDQANQ 120 TNQPNIHVYP DWAAMQAYYG QRVTMPPYYN SAVASGHAPH PYMWGPPQPM MPPYGPPYAA 180 IYSHGGVYPA VPIGPHTHSQ GVPSSPAAVT PLSIETPPKS SGNNDQGLMK KLKEFDGLAM 240 SIGNGHAESA ERGGENRLSP SVDTEGSSDG SDDNTSGANQ TRRKRSRGGT PTTGEIAEVF 300 ILAISLVNVV WGIGVSWLQI TIVVEMSYKP KCVILTDGEG KTEIQSSPIS KDTAASNKIV 360 AVAPASVAGT IVGPVVSSGM TTVLELRNPS SVHSKANTTS APQPSNEREL KRERRKQSNR 420 ESARRSRLRK QAETEELARK VDSLNSENGT LKSEINRLTE SSEKMRVENA TLREKLKIAR 480 LGQTQEITLN IIDSERATPV STENLLSRVN NNSSSNDRTM EDENDFCENK PNSGAKLHQL 540 LDTSPRADAV AAG*

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence Send to blast

VDFAFALLPS LLVTTTIPHL CVKAHCCFPR FLERENAHSK LIVSPYLDPF FGYLELPGVF  60
SPCVFMVFLA RCFVGEDNIW PIGYLVSALY LECTMGNNEE EKSTKTEKPS SPATMDQANQ  120
TNQPNIHVYP DWAAMQAYYG QRVTMPPYYN SAVASGHAPH PYMWGPPQPM MPPYGPPYAA  180
IYSHGGVYPA VPIGPHTHSQ GVPSSPAAVT PLSIETPPKS SGNNDQGLMK KLKEFDGLAM  240
SIGNGHAESA ERGGENRLSP SVDTEGSSDG SDDNTSGANQ TRRKRSRGGT PTTGEIAEVF  300
ILAISLVNVV WGIGVSWLQI TIVVEMSYKP KCVILTDGEG KTEIQSSPIS KDTAASNKIV  360
AVAPASVAGT IVGPVVSSGM TTVLELRNPS SVHSKANTTS APQPSNEREL KRERRKQSNR  420
ESARRSRLRK QAETEELARK VDSLNSENGT LKSEINRLTE SSEKMRVENA TLREKLKIAR  480
LGQTQEITLN IIDSERATPV STENLLSRVN NNSSSNDRTM EDENDFCENK PNSGAKLHQL  540
LDTSPRADAV AAG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	423	429	RRSRLRK
2	423	430	RRSRLRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang03g09900.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031145	0.0	KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014491552.1	0.0	common plant regulatory factor 1-like isoform X4
Refseq	XP_014491555.1	0.0	common plant regulatory factor 1-like isoform X5
Swissprot	Q99089	1e-124	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A1S3TCP8	0.0	A0A1S3TCP8_VIGRR; common plant regulatory factor 1-like isoform X4
TrEMBL	A0A1S3TCR8	0.0	A0A1S3TCR8_VIGRR; common plant regulatory factor 1-like isoform X5
STRING	GLYMA03G41590.5	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5301	34	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-78	G-box binding factor 3

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]