|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Vang0345s00120.1 |
Common Name | LR48_Vigan08g034200 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
Family |
NAC |
Protein Properties |
Length: 324aa MW: 36156.3 Da PI: 6.877 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0345s00120.1 | genome | SNU | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 175.1 | 2e-54 | 17 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelvv+yLkkkv++ +l++ ++i++vd+yk++Pw+Lp+k + +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++
Vang0345s00120.1 17 LPPGFRFHPTDEELVVHYLKKKVDSVPLPV-SIIADVDLYKFDPWELPAKSSFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIC 108
79****************************.89***************8888899************************************** PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
s ++++vg+kk+Lvfy g+ pkg+ktdW+mheyrl
Vang0345s00120.1 109 S-GTQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRL 142
*.999****************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0045995 | Biological Process | regulation of embryonic development |
GO:0048317 | Biological Process | seed morphogenesis |
GO:0080060 | Biological Process | integument development |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MDSTEDSSTS SQQQPNLPPG FRFHPTDEEL VVHYLKKKVD SVPLPVSIIA DVDLYKFDPW 60 ELPAKSSFGE EEWYFFSPRD RKYPNGARPN RAATSGYWKA TGTDKPICSG TQKVGVKKSL 120 VFYGGKPPKG VKTDWIMHEY RLAETKPNNR PPGCDLGHKK NSLRLDDWVL CRIYKKGNTQ 180 RSAMEQERDD SMDDMIGEVP SSMNVGHMNA RFHLSKMCTS YSGALLENDR NTLEGVVIGN 240 GVNGMSTTTT SAMPSQFGTS ASKRTLSTLY NWNDDSDEKH FNLDTNGNVS VVRTEENNAS 300 PGSFATLLNQ LPQYQIQGTN WYG*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By Jasmonic acid (JA). {ECO:0000269|PubMed:16805732}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KT031215 | 0.0 | KT031215.1 Glycine max clone HN_CCL_7 NAC transcription factor (Glyma12g22790.1) mRNA, complete cds. |