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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0300s00080.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
Trihelix |
Protein Properties |
Length: 377aa MW: 43114.4 Da PI: 7.4587 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0300s00080.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 72.3 | 8.5e-23 | 42 | 108 | 1 | 67 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67
rW+k+e++aL+++r++m+ ++r+++ k+plW++vskk++e g++rs+k+Ckek+en+ + y + +
Vang0300s00080.1 42 RWPKEETMALLKIRSDMDVAFRDTNPKAPLWDQVSKKLAELGYNRSSKKCKEKFENIYNAYVGEHSS 108
8**********************************************************99776655 PP
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2 | trihelix | 97 | 1.7e-30 | 200 | 290 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+k+ev aLi++r+e++ +++ ++ +k+plWe++s++m+ g+ers+k+Ckekwen+nk++k++ke +k++ +++s+tcpy+++le
Vang0300s00080.1 200 RWPKDEVEALIRLRTELDVQSQGNNnssngvSKGPLWEDISSAMKGLGYERSAKRCKEKWENINKYFKRMKEKNKRK-PQDSKTCPYYHHLE 290
8**************9999988544445666********************************************96.9***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MLEVSASPET PLANPEGGAA AVSEGLKAED GEAGDRNSAA SRWPKEETMA LLKIRSDMDV 60 AFRDTNPKAP LWDQVSKKLA ELGYNRSSKK CKEKFENIYN AYVGEHSSST TSCSGKGFRK 120 RKLTQFLDGL MREVIEKQET LQRKFVEVLE KCEKDRMARE EAWKKEELAL IKKERELLAQ 180 ERSIAAAKDE VVLAFLRNSR WPKDEVEALI RLRTELDVQS QGNNNSSNGV SKGPLWEDIS 240 SAMKGLGYER SAKRCKEKWE NINKYFKRMK EKNKRKPQDS KTCPYYHHLE VLYSKKPKRA 300 DVKDFGKELK PEELLLHIME SQSQEERQAQ QQQVQSHSSS EDGEKDDRDQ REGDEEDQNG 360 FQNVMLENSP SRAIMS*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |