PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g03590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 977aa    MW: 109635 Da    PI: 7.0361
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g03590.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.51.9e-092252802176
        trihelix  21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                     + rgk ++ + +ev+++++++g++r +k+   kw+n+ ++++k+ e+e++++ e+ 
  Vang02g03590.1 225 ITRGKTRADKDKEVAEFLKRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQI 280
                     45789999999**************************************9965544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.510.101.6E-8837958No hitNo description
SuperFamilySSF561123.42E-17837958IPR011009Protein kinase-like domain
CDDcd001808.17E-12839959No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 977 aa     Download sequence    Send to blast
MFAFACCDPL YFVTFPFEDM AEVPSSIYQG NKRIQNPFEN MPIHHHQQLS PVVVVTGAPP  60
FISSPLYVSS GASSSPYEPQ FETLNPKRPR YSGQWKQLLP SPPAQPKQSQ MAMLPTTESS  120
PSPTTHTSPN PQQPQTQTAS SSDTSSSPTH SLPLLSGGSG QEGSKQEGEQ VHQQLRKGKY  180
VSPVWKPNEM LWLARAWKEQ YQGGGGGGSE SSSRAEQQHQ AELGITRGKT RADKDKEVAE  240
FLKRHGVNRD AKTAGTKWDN MLGEFRKVYE WERGGEREQI GKSYFRLSPY ERKLHRLPAS  300
FDEDVFEELA QFMGSRMRSS QGRAGSSFVS GDEARTALAA ARALPPPPRP FKDDETPLSG  360
TTKQLAITSG VEPFFHGSRG GLLGLDTLVD VSGSSSSSKE LRRIGKIRMT WEESVSLWAE  420
EGEIHRGRVR LQSSSFLNAD ELTCFDEAMV PCPMEYFEDG PLKGFSVDRF VLLKESNFPP  480
KHFPLDRIII FCVGVAAIAT LDFRDPTEYY MECLLRASPQ TLPSLYELRR HLQEPPPEDL  540
RFPLRRDVYE ELPQGKELFF TTTPEPLDCR TIMYDIVGPI IRIHNPSLSL AASSSRDSFI  600
PLWDECINRV IQKFCPEELT LIRKPTSPPP ESTNQSMLQD QWPNVTGFVN NYSLWRGEET  660
HQLKESQPNP STTLVGKLMW TYMDLPYILG YYAVANTVTF CALSRSQDGI INRTDLHEVN  720
LTTPVEKLKA LVPCFRIGLL LALLSKRCAS ISNCKGFTYS DFERVCYGNG VVTEVTPSTC  780
TRVFMEKRKW MAVKEVYEIL DHRIPHAEVL VGFSERELGL SFKPRGCRVK PGNCEELVEA  840
LKFVTKAMVA LHDLSFMHRD LKWEKVMRRR DREEWFVCGF DEAAGAPELK GHVSGTRGGH  900
APEMERGLHG VKVDVWGVGN LIRTCGLGGV PKMLRELQNR CMEQNPEQRP TAADCYHHLL  960
QLQSSLSAAA GGVMMM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g03590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017438089.10.0PREDICTED: uncharacterized protein LOC108344133
TrEMBLA0A0L9VJ250.0A0A0L9VJ25_PHAAN; Uncharacterized protein
STRINGXP_007152366.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118572831
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-08Trihelix family protein