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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Vang02g02420.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
Trihelix |
| Protein Properties |
Length: 229aa MW: 26302.7 Da PI: 5.1464 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang02g02420.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 48.8 | 1.8e-15 | 39 | 124 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+++e+ +L+e+ ++ +l+r++l+ W ev++k+ +e + ers +qC++ +++l+++ykk+k+ + + s ++p+f++++
Vang02g02420.1 39 EWSEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVsEELKTERSVTQCRSVLDKLKRKYKKEKTKMDEM-GMGSCKWPFFKKMD 124
5*************************************88899***************************97.666779*******8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MEDDARYPPK SFSLNRSYEF APRFKLSYGS RGSGSSGEEW SEHETFVLLE VWGDKFLQLG 60
RNSLRSEEWH EVAEKVSEEL KTERSVTQCR SVLDKLKRKY KKEKTKMDEM GMGSCKWPFF 120
KKMDMLMASS ARQEYGLACG VDSGDKRQQM MELEKMRLDF NRELELQKKQ ILERAQAEIA 180
KIQDGDEEET DTSTENLIDN PGKGGDILIE CTSFGGNIVY TLIKRSSQ*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |
