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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0216s00420.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
MYB |
Protein Properties |
Length: 374aa MW: 41765.1 Da PI: 8.3955 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0216s00420.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.2 | 8.1e-18 | 120 | 165 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed++l+++v+q+G+ +W++Ia+++ gR++k+c++rw++
Vang0216s00420.1 120 RGHWRPAEDDKLKELVAQYGPQNWNLIAEHLE-GRSGKSCRLRWFNQ 165
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 49.5 | 9.5e-16 | 175 | 216 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+ +eE+e+l+ a+k++G++ W+ Iar ++ gRt++ +k++w+
Vang0216s00420.1 175 FCEEEEERLLTAHKMYGSK-WAMIARLFP-GRTDNAVKNHWHVM 216
558****************.*********.***********975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051782 | Biological Process | negative regulation of cell division |
GO:0071367 | Biological Process | cellular response to brassinosteroid stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 374 aa
Download sequence Send
to blast |
LLVFCFCFLF SVFVSMDSSS WYFNNVVGEG FNGVMSFIPS FHVRSQAPPL GHGKGVLGPN 60 LEMGLQMLSP SMVQQQESRG KKRTSDEGVT NKNLSLKREE EEEANGSISG KNGFTKLCAR 120 GHWRPAEDDK LKELVAQYGP QNWNLIAEHL EGRSGKSCRL RWFNQLDPKI NKKCFCEEEE 180 ERLLTAHKMY GSKWAMIARL FPGRTDNAVK NHWHVMMSRR QREREQSSGV YRRRKPLINE 240 PLPKGLNLTL SNNATSDEST ISNTIDESAS TCTNLSLTPS SAKFTPFGLL HQPGESREDV 300 WLKKYFGGWK GSEGVVGKRV MGVEQCSFSD ANSEVSVSES GVTNRSNLSI SQEKESDKIN 360 NISFIDFLGV GAT*
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Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |