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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vang01g18130.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
TALE |
| Protein Properties |
Length: 391aa MW: 44679.7 Da PI: 6.9523 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang01g18130.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.6 | 2.4e-09 | 323 | 358 | 20 | 55 |
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55
+k +yps++e+ LA+++gL+++q+ +WF N+R ++
Vang01g18130.1 323 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 358
5679*****************************885 PP
|
| 2 | ELK | 37.8 | 4.1e-13 | 278 | 299 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK++LlrKYsgyL+sLkqE+s
Vang01g18130.1 278 ELKNHLLRKYSGYLSSLKQELS 299
9*******************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001708 | Biological Process | cell fate specification |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010089 | Biological Process | xylem development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 391 aa
Download sequence Send
to blast |
MEGYTNNNHL SENTAPSPSP RPNFLYSPPT GGSHSHSHSH HQHQHQHHSH HHQHHQFPIN 60
TFHLQSGGSD HCFQSDQVAP HPSVKTEAST SQLHAPIFHY PLMRGTLHSN TTTTMHHHPH 120
QQGGSPTSST TEVEAIKAKI IAHPQYSNLL EAYMDCQKIG APPEVVARMV AAKQEFEARQ 180
RSSGGSRDTS KDPELDQFME AYYDMLVKYR EELTRPIQEA MDFMRRIETQ LNMLCNGPVR 240
IFSAEDKCEG VGSSDEDQEN SGGETELPEI DPRAEDRELK NHLLRKYSGY LSSLKQELSK 300
KKKKGKLPKD ARQKLLNWWE LHYKWPYPSE SEKVALAEST GLDQKQINNW FINQRKRHWK 360
PSEDMQFMVM DGLHPQSATL YMDGHYMADV *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably binds to the DNA sequence 5'-TGAC-3'. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HM107002 | 0.0 | HM107002.1 Glycine max KNOX-like DNA-binding protein mRNA, complete cds. |
