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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Vang01g15310.2 |
| Common Name | LR48_Vigan07g246400 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
ERF |
| Protein Properties |
Length: 207aa MW: 23712.2 Da PI: 4.4036 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang01g15310.2 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 52.4 | 1.3e-16 | 2 | 50 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr +k +g+Wv+eIr p++ r r++lg+++t +Aa+a +aa +l+g
Vang01g15310.2 2 YKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTQVKAARAFDAALYCLRG 50
9****999.**********933...5**********99*************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MYKGVRKRKW GKWVSEIRLP NSRERIWLGS YDTQVKAARA FDAALYCLRG KGASFNFPDT 60
PHLFEMESLK IPCSHQEIQE VAAKFANKVV EILAEEEEED GEVGVQSESM SDHTTHTETN 120
TTFPIYDGGT NNDVRVDQDT MDWTFMNMLD DLNGSDFGLY FEAEKGEFLC PTTHTPLLFH 180
NGDEIEVDDH DHDAFSNHSF LWSWNF*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yang K, et al.
Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
[PMID:26460024] - Chen HY, et al.
ORA47 (octadecanoid-responsive AP2/ERF-domain transcription factor 47) regulates jasmonic acid and abscisic acid biosynthesis and signaling through binding to a novel cis-element.
New Phytol., 2016. 211(2): p. 599-613
[PMID:26974851] - Hickman R, et al.
Architecture and Dynamics of the Jasmonic Acid Gene Regulatory Network.
Plant Cell, 2017. 29(9): p. 2086-2105
[PMID:28827376]
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