PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g12310.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 347aa    MW: 37915.1 Da    PI: 5.0948
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g12310.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.9e-14182235457
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      kr rrk +NRe+ArrsR+RK+a ++ Le  v+ L +eN+ L k+l   +++  
  Vang01g12310.1 182 TKRLRRKDSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFKQLRDASQQFR 235
                     69****************************************977776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-11177235No hitNo description
SMARTSM003381.9E-15179243IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.358181244IPR004827Basic-leucine zipper domain
PfamPF001706.3E-11182230IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.09E-10183233No hitNo description
CDDcd147027.44E-9184235No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
LELPHAWKFL YIGIKQLLLS PFLSLYSFVS FSFSGEMEAK LGGAAGVMAA TFDDFKWISF  60
MFDHDINDDV KPCKLDPFTG ASGHLNDAFE NLDAVTAFSS CGGITDGTVF YSENLTPVQS  120
AISATIDSQS SICVGSPVSG NKPNGRDNEV KGATTTSGSS REPSDEDDEA GLCEQSTNTV  180
DTKRLRRKDS NRESARRSRR RKQAHLADLE WQVERLRQEN SHLFKQLRDA SQQFRNADTD  240
NRVLNSDVEA LRAKVKLAED MVRRGTVPPF NNQILPNLSE LSNMNNVRGM AHVSPTITVH  300
GNDGASYGAG ITLSGHNSPL ELGNLDIPCT DFNTDNAVSS ITTMWP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185201RRKDSNRESARRSRRRK
2195202RRSRRRKQ
3197202SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g12310.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-155AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429087.10.0PREDICTED: basic leucine zipper 9-like isoform X1
SwissprotQ9FUD38e-53BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A0S3RN210.0A0A0S3RN21_PHAAN; Uncharacterized protein
STRINGGLYMA17G24602.11e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-45basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]