PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g05380.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 465aa    MW: 50712.2 Da    PI: 8.1408
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g05380.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.6e-32274327255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Vang01g05380.1 274 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 327
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.87E-15271327IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-28272327IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23274327IPR006447Myb domain, plants
PfamPF002498.7E-7275326IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009887Biological Processorgan morphogenesis
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0009956Biological Processradial pattern formation
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MTLEGIFIEP TSTTAPDLSL HISPPSISSS LISNTNNIIN YEPQPSFLSR TVSQAHTELS  60
LGRNFTSARE TPPPPPTPTP HNPYYPTQTQ THFHHLLHSS SSSSTTTTSN IPTSVPTSAN  120
TPLNHINYGV SLLDVSSSDG LRPIKGIPVY HNRSFPFVAM DHARDNKDPH TKMCLYHHMP  180
SYPSLSSSCS SLCSTTAPSS SPSPYFVDPM SFLNNASTVG CRTATATRFN GFSGDAFKSH  240
PLHQYGVGSS EASSGFMRSR FLSKLPNKRS MRAPRMRWTS TLHARFVHAV ELLGGHERAT  300
PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKPAASSGH SDGSGEDDLS PIGSTADRGS  360
LRQFPSHRGR PDWVAQQDMD YSSTTTLWSN SSSCGESRQR TTSNDIDGLR SPIIQSQTIS  420
GAHQIQECDS TQQKNNMGGS NLECKNPSLE FTLGRPHWDG KEQA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-16275329357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-16275329357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-16275329357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-16275329357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-17275329458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g05380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017431002.10.0PREDICTED: transcription repressor KAN1-like
TrEMBLA0A0S3RL080.0A0A0S3RL08_PHAAN; Uncharacterized protein
STRINGGLYMA14G39260.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.14e-57G2-like family protein