PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g01490.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 567aa    MW: 61416 Da    PI: 7.1722
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g01490.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.26e-32213270260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers+ d+++ ei+Y+g+H+h+k
  Vang01g01490.1 213 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQIAEIIYKGTHDHPK 270
                     8****************************************.***************85 PP
2WRKY106.31.6e-33388446159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Vang01g01490.1 388 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 446
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-27207271IPR003657WRKY domain
PROSITE profilePS5081123.835207271IPR003657WRKY domain
SuperFamilySSF1182905.23E-25209271IPR003657WRKY domain
SMARTSM007743.7E-34212270IPR003657WRKY domain
PfamPF031062.2E-24213269IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-37373448IPR003657WRKY domain
SuperFamilySSF1182902.09E-29380448IPR003657WRKY domain
PROSITE profilePS5081138.825383448IPR003657WRKY domain
SMARTSM007743.1E-39388447IPR003657WRKY domain
PfamPF031063.4E-26389446IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MDASAEPSPS SELRLNGASE DPNRGGSGQN STARYKLIAP AKLPISSLVE NGFFRAGSLL  60
VESSPTTGSL RKLQQTVHGS KASATFAVTT ACFNTNTVDD RKSSFFEFKP LNRLNMVPAD  120
FNNHVIKQST QAEGLGKAQS FVSSPLVESE IAVPANELSL SSPVQMVSSS PSAPVDVDLD  180
DVNHKSNTAT GLQESHVEVR GNGISVAAEK TSDDGYNWRK YGQKLVKGSE FPRSYYKCTH  240
PNCEVKKLFE RSHDGQIAEI IYKGTHDHPK PQPSCRYSTG TIMSIQVERS DKDSSLAGLD  300
DKASSMYGQL SHAAERNSAS EPSTIATNDD GLEGVGFVSN RISDDTDDDD PFSKRRKMEL  360
GSVDITPVVK PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNAGCP  420
VRKHVERASH DPKAVITTYE GKHNHDVPAA KNSSHDMAVA AAGQTRIKLE ESDTISLDLG  480
MGISSAAEHR SNAQGKIMHS EFGSTQTHTS NSNFKFVHTT SAPVYFGVLN NSSNPYGSRD  540
NRSDGPALNH ASYPCPQSMG RILMGP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A8e-38213449878Probable WRKY transcription factor 4
2lex_A8e-38213449878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g01490.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY3231280.0AY323128.1 Glycine max putative WRKY-type DNA binding protein (WRKY1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017410619.10.0PREDICTED: probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV01e-166WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A0S3RJ390.0A0A0S3RJ39_PHAAN; Uncharacterized protein
STRINGXP_007142379.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-157WRKY family protein