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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0184s00180.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NAC |
Protein Properties |
Length: 261aa MW: 29582.7 Da PI: 9.7815 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0184s00180.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 104.6 | 1.2e-32 | 29 | 169 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79
lp+G++F+Ptd+e++ e+L++kv+++ ++l+ +++ +i+ ++P++Lp v+++ +fF++ +k+y+tg+rk+r+++
Vang0184s00180.1 29 LPAGVKFDPTDQEIL-EHLEAKVRSDIHKLHPlidefipTLEGEnGICCTHPEKLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHtdadgs 119
799***********9.99*****99984443333332222333336**********.555555677******************744446555 PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
+ +W++tgk+++v+ +g+l+g kk+Lv+y++ +++k+ekt+Wvmh+y+l
Vang0184s00180.1 120 ETRWHKTGKTRPVYI-SGKLKGYKKILVLYTNyrKQRKPEKTNWVMHQYHL 169
788************.999***********5444788889*********98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MAKDSVVKLS MMLRAKPLKA AGIHDLPGLP AGVKFDPTDQ EILEHLEAKV RSDIHKLHPL 60 IDEFIPTLEG ENGICCTHPE KLPGVSKDGL IRHFFHRPSK AYTTGTRKRR KVHTDADGSE 120 TRWHKTGKTR PVYISGKLKG YKKILVLYTN YRKQRKPEKT NWVMHQYHLG NNEEEKEGEL 180 VVSKVFYQTQ PRQCGSLMKD SYPAKLNGES VHEVTNHKST GFVEFYNNSF VSFDQGDQHR 240 PSSAQLVTHF PVHDGATFIP *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |