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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0176s00100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
C2H2 |
Protein Properties |
Length: 297aa MW: 33852.8 Da PI: 9.8375 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0176s00100.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 10.8 | 0.0015 | 130 | 152 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C ++++++ +L H + H
Vang0176s00100.1 130 SCSVCFRVYPTSRLLSIHVSEvH 152
6*****************99877 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MTQKYGPHSE VSIQFKIESG KRIPCVIEVK SVKMAMEVEN NHNQQLGFPF WKPIRRKFGP 60 DSPFFAPGNL ERELLAKQVA LELTEEKEQL EKWMQEEEGR EIFCPIVGCG ARLTSMDDFE 120 NHYNARHTAS CSVCFRVYPT SRLLSIHVSE VHDSFFQAKV ARGYDMVFGY LLPSSYECLV 180 EKCGLKFKSY NRRHQHLVDK HKFPTSFEFF KKAKPSKKQR LKSQQKKAVP KEKDAGMMEV 240 ENATVDDLVS AVSKLSTSDS TPSNISFGRR SKGLSFVPRT VQRRDQSNPA ASGTKR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G14140.1 | 1e-99 | zinc ion binding;nucleic acid binding;zinc ion binding |