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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0134s00500.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
HD-ZIP |
Protein Properties |
Length: 142aa MW: 16460.9 Da PI: 9.6184 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0134s00500.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 61 | 1.9e-19 | 50 | 104 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+ ++t++qle+Le+ F+++ +++ e++ +L+++lgL+ r++ vWFqNrR+++k
Vang0134s00500.1 50 EKKKRLTSNQLEILERSFQEETKLDPEKKMKLSRELGLQPRKIAVWFQNRRTRWK 104
67788*************************************************9 PP
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2 | HD-ZIP_I/II | 112.6 | 2.5e-36 | 50 | 132 | 1 | 83 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLeke 83
ekk+rl+++q+++LE+sF+ee+kL+pe+K++l+reLglqpr++avWFqnrR R+ktkqlE+ y+aLk++yd +++e+++L++e
Vang0134s00500.1 50 EKKKRLTSNQLEILERSFQEETKLDPEKKMKLSRELGLQPRKIAVWFQNRRTRWKTKQLEHLYDALKHQYDVISNEKQKLQEE 132
69******************************************************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MVITTRSSNT LLLFQRNPLC CTCSGVEVQQ ATLLETGEGS IPSMHNGSKE KKKRLTSNQL 60 EILERSFQEE TKLDPEKKMK LSRELGLQPR KIAVWFQNRR TRWKTKQLEH LYDALKHQYD 120 VISNEKQKLQ EEGLCHERHP G*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 98 | 106 | RRTRWKTKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |