PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0090s00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 269aa    MW: 29555.4 Da    PI: 9.8519
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0090s00020.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.2e-393392261
            zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                      k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s
  Vang0090s00020.1 33 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 92
                      7899******************************************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-302991IPR003851Zinc finger, Dof-type
PfamPF027015.4E-343491IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.2643791IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103975IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MDTAQWAQGI GVVKPMEGSK PPPMLERRAR PQKDQALNCP RCNSTNTKFC YYNNYSLSQP  60
RYFCKTCRRY WTEGGSLRNV PVGGGSRKNK RSTPSAPSPA SAPTKKLPDL TPPNFPQSAS  120
QDPKIHQGQD LNLAYPPAED YNTVSKFIEV PYTTELDKGS LQNATSSSTP SQLSAMELLK  180
TGIASSRGLN SFMPMYNSTG FPLPDFKPPP GLNFSLEGFE NGYGGLQGIQ EGPTGARILF  240
PVEDLKQQDL RARFSATTAR KRIPINTIV
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0090s00020.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017420557.10.0PREDICTED: dof zinc finger protein DOF4.6-like isoform X1
TrEMBLA0A0S3REK80.0A0A0S3REK8_PHAAN; Uncharacterized protein
STRINGXP_007136465.11e-180(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67434137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.41e-53Dof family protein