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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0082s00050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
TALE |
Protein Properties |
Length: 232aa MW: 26209.5 Da PI: 6.6379 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0082s00050.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 31.3 | 3.4e-10 | 174 | 208 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yp+++++ eLAk++gL+++q+ +WF N+R ++
Vang0082s00050.1 174 KWPYPTEADKIELAKSTGLDQKQINNWFINQRKRH 208
679*****************************885 PP
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2 | ELK | 32.5 | 1.9e-11 | 128 | 149 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK++LlrK+++++g+Lk EFs
Vang0082s00050.1 128 ELKDRLLRKFGSHIGTLKLEFS 149
9********************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MDEMYGVPDY ADKPLMTPEN LIFPPDYPAF LTAARIPIFG SDDLFSGEPS AASASPAGIP 60 RHQDDDVATT VMKAKIASHP HYPRLLQAYI DCQKVSKENH DGGVSSDEDL STGDGDGQDG 120 QSKGEDRELK DRLLRKFGSH IGTLKLEFSK KKKKGKLPKE ARQTLLQWWN VHYKWPYPTE 180 ADKIELAKST GLDQKQINNW FINQRKRHWK PSENMQFSMM ENLNGRFLGD E*
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Functional Description ? help
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Source |
Description |
UniProt | Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'. {ECO:0000269|PubMed:16798887}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Seems to be repressed by AS2 and AS1 but induced by STM, CUC1 and CUC2. {ECO:0000269|PubMed:11311158, ECO:0000269|PubMed:16798887}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-165 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |