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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0069ss02080.1 |
Common Name | LR48_Vigan406s024200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
bHLH |
Protein Properties |
Length: 454aa MW: 49562.1 Da PI: 5.9545 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0069ss02080.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 22.3 | 2.4e-07 | 367 | 407 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r RR+ri +++ L++l+P K++ a++L +A +Y+k L
Vang0069ss02080.1 367 ARHRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 407
599*****************95.....5****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MDGLSWDTSQ LEANTPILWS TIQPPPDFEG GYSMPNVVNQ IQDLQKAQTG LAHSDSERVI 60 YQSADATTAS SEIMDVMQRQ NTNLLQHAPT MMPVKSGTGA SWGEAFTSQS YPSLSVNGPQ 120 RMNLISNYMP DFSMAHQQQQ QQQLVNGSQN GKGACSLESF DCLISATNSS TDTSVEDDSI 180 SMILSDCRNL WNFSYGSAAS TGESESNASN GRKEDKRCPV KEVDETVSQS SLDRGKTVQS 240 KANCSKRSHE ETGMIKVGAT GSGSCFSIVQ NSSSVEEGGF RLISDDPSKS KKPRWEKSSS 300 SNNINFQQPN SSMSSSIEEP DPEAIAQMKE MIYRAAAFRP VNFGLDAAEK PKRKNVRIST 360 DPQTVAARHR RERISERIRV LQKLVPGGSK MDTASMLDEA ANYLKFLRSQ VKALECLGNK 420 VEAMNCPPTS IAFSFNPSFP MQTSLSQIHH SQG*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015042 | 0.0 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |