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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0052ss00120.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
B3 |
Protein Properties |
Length: 508aa MW: 57627.1 Da PI: 7.196 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0052ss00120.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 46.6 | 5.9e-15 | 39 | 129 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
ffk t+ d+l++ l++p f + +++ +k++ l+d++g++W+vk+ + g++v+++GW++F + +gLk+g +v+ ++++ f
Vang0052ss00120.1 39 FFKFITRQDYLTT--LCIPPAFS-GIvaSMV---NKKINLNDSTGQQWKVKV--SEVNGSFVFGEGWSRFSSGHGLKVGYLLVLNYIKDLHF 122
7888888888887..89****97.5544333...468***************..999999**************************987666 PP
..EEEEE-S CS
B3 91 elvvkvfrk 99
vk++++
Vang0052ss00120.1 123 --DVKIYDT 129
..8888876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 508 aa
Download sequence Send
to blast |
LIEKRGKMGG EEQGVSVCAA CTHNCLLFHQ PKQTSPTSFF KFITRQDYLT TLCIPPAFSG 60 IVASMVNKKI NLNDSTGQQW KVKVSEVNGS FVFGEGWSRF SSGHGLKVGY LLVLNYIKDL 120 HFDVKIYDTS ACEKLGLPEK RNQKKRSRGK IGSPVRDGIL VRQELDAPRQ CSKVDLVVPQ 180 KAKESGQHVL ILDHSEEDPC RSKSLEFDQS HEDDGTMKSQ NGDLIVSNVD YESNIVEKDA 240 MICSKDTMFE GVLSTEVALD ISELRIYGRS ASLEADTYTY DKTFNSKIEE NKAILSNREA 300 QECQFSKALG KMKKFPVDMT PNLDSSMDEF HLTGEVSKKL KKELVTLNEM EATGLPKEIN 360 GLLNSDIFNE DNASHFKPTQ LSCVVPHDNV FLVHFTMFFY VCLFILSSLF EHLYLSLLQE 420 LPSCLPLIRK VKVDQQRKML VFLRDPLRRL WPVYYHEKPH LKLLAHGWLN FSRANNIQPK 480 DECIFEAEVD PECKSKRILS VQIVHNK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |