PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0045ss01060.1
Common NameLR48_Vigan1300s000700
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 325aa    MW: 35932.8 Da    PI: 7.1645
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0045ss01060.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.84.7e-082563021763
                        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  Vang0045ss01060.1 256 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMEN 302
                        89***********************************9998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-4245304IPR004827Basic-leucine zipper domain
CDDcd147034.36E-17247295No hitNo description
SuperFamilySSF579596.26E-6256298No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-7256299No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGLGLGIVDS ASMANSKGSS GFRNFMYPGK HALLPPKSPF PSVSQGYSDY VQNPAVGLKG  60
GNRPRDGNPH HQRTSSESLV IEEQPSWLDD LLNEPETPVR RAGHRRSSSD SFAYLDMANA  120
SNINYADQDE YKYKSLMSIP SWSSQDFDRS KDARHLPAYV DMNLSKQKNR SWDSFSNAMT  180
NPVGVPSGKD SSAFQSSGLP STPQEADGLA PTATEKQDSV EPGLQDAKSF SEKKDNSHAK  240
SSSSETDTKR AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GSEVSAELEF LNQQNLILSM  300
ENKALKQRLE NIAQEQLIKY CKFL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0045ss01060.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017411452.10.0PREDICTED: uncharacterized protein At4g06598
TrEMBLA0A0L9TIE50.0A0A0L9TIE5_PHAAN; Uncharacterized protein
TrEMBLA0A0S3QYV60.0A0A0S3QYV6_PHAAN; Uncharacterized protein
STRINGXP_007159569.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-106bZIP family protein
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]