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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0033ss01360.1 |
Common Name | LR48_Vigan01g097200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
NAC |
Protein Properties |
Length: 405aa MW: 45559.6 Da PI: 8.786 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0033ss01360.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.6 | 9.8e-53 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
+ pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d+++
Vang0033ss01360.1 15 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPI 105
579***************************.89***************8888999************************************* PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+s+ +++ +glkk+Lvfykgra kg ktdW+mhe+rl
Vang0033ss01360.1 106 YSSeGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 142
**956677***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MEERNDNGEK LDEVMLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKYDPWDL 60 PKLATTGEKE WYFYCPRDRK YRNSARPNRV TRAGFWKATG TDRPIYSSEG SKCIGLKKSL 120 VFYKGRAAKG IKTDWMMHEF RLPSLTNSSS SPKKFMDKTI PANETWAICR IFKKTNATAQ 180 RALSHSWVSP LPETTTSDHM LATDRYGNQF STENMPLPKK TSLASQFCTF NNNDSQHSTT 240 TSRSTPCPID ILASYNRPII NPLMLYKPLD LLPISNGDLS SGLIFSSPIE TSTNCAKSSM 300 DVSSMLMSTS TSVLGEFNSK TSEGMCTNFG GLQEHSNGYQ IPLLREMQGS FGNHDDNVLV 360 KIPNVNVPRV GDQQSETVRS IGFPFSIGDA WKSNVLWDTS SLSL*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-52 | 17 | 181 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-52 | 17 | 181 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-52 | 17 | 181 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-52 | 17 | 181 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-52 | 17 | 181 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-52 | 17 | 181 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-52 | 17 | 181 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |