PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0021ss02290.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family TALE
Protein Properties Length: 731aa    MW: 81176.8 Da    PI: 7.0017
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0021ss02290.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.93.6e-085405712354
                        SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
           Homeobox  23 rypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         yp+ +++  LA+++gL+ +qV++WF N R +
  Vang0021ss02290.1 540 CYPTDTDKHMLASQTGLSRNQVSNWFINARVR 571
                        59****************************87 PP
2BELL971.6e-31396465372
               BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         + q+kkakLl + eeV ++ kqy+ q+q+vissFe vagl sa+pY+s+Alk +S+hFrcLk+ i++q+
  Vang0021ss02290.1 396 PDYQQKKAKLLYMHEEVTRQCKQYHLQMQMVISSFESVAGLSSATPYVSMALKSVSKHFRCLKNSISDQL 465
                        5789***************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.4E-38299463IPR006563POX domain
PfamPF075262.2E-38304462IPR006563POX domain
SMARTSM003892.4E-5523579IPR001356Homeobox domain
CDDcd000864.26E-9523576No hitNo description
Gene3DG3DSA:1.10.10.609.6E-17537579IPR009057Homeodomain-like
PfamPF059204.7E-13538571IPR008422Homeobox KN domain
SuperFamilySSF466893.68E-11539581IPR009057Homeodomain-like
PROSITE profilePS5007110.738541575IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 731 aa     Download sequence    Send to blast
MSSLRPESHV AQQIRREKLR IQNSSQPLHE FPNNLEPLSL QPGFNNFDLL HVRNVRNANM  60
LDEPVVYPPE MPNFSTLNPL STPKNALEYH QEIGAAEASN RLMMNQYGSF SHSMPSIHSS  120
HKEQCELRNL GNWRNSAPQQ GSDWFINYPS NANSFLSSEL SNVSSYNELM DAQQDMTSLM  180
QQNDHSIWVG NSTEVELQQP SYGNQPNPLR FGWTNRAIDN IPSDSLPQSL SLSLSSNAQP  240
KPSVSQHEQG STSDDPRCLK YMMPSIVSRD FAKSLQDTVG MPSKSTISYR SVGPLGPFTG  300
YATILKSSRF LKSVQQLLDE IFCVSGAKFA KSYDVSERVS PEVSASTSAD TVTVNNTGFT  360
AKGSNSGSSS TMLYNVSKEN CSDLGVGSSF GLSSRPDYQQ KKAKLLYMHE EVTRQCKQYH  420
LQMQMVISSF ESVAGLSSAT PYVSMALKSV SKHFRCLKNS ISDQLKLVSE ALGEDVSIPS  480
CSTGSKADTT MARIRCSMDQ SFLKNKSGRG STTDLLDPQQ HVWRPQRGLP ERAVAILKAC  540
YPTDTDKHML ASQTGLSRNQ VSNWFINARV RVWKPMVEEI HMLETKATGT REKSGKHEGT  600
SSGPEGGDSS QPRVDKPLRN IGMNSIPENR FEGMEMESSN AEERGLSEEE WSQEKRSKLE  660
CQMTSNNMDG TLMGFMPYRR GGLEVGGLDS VSLTLGLRHG VEGVQHQQQL QEEQLRHHHL  720
GGHMIRDYVG *
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0021ss02290.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424355.10.0PREDICTED: BEL1-like homeodomain protein 9
RefseqXP_017424356.10.0PREDICTED: BEL1-like homeodomain protein 9
RefseqXP_017424357.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A0S3SGL90.0A0A0S3SGL9_PHAAN; Uncharacterized protein
STRINGXP_007150172.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.15e-66BEL1-like homeodomain 8