PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0021ss00670.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | EIL | ||||||||
Protein Properties | Length: 626aa MW: 70103 Da PI: 6.9004 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 435.4 | 5.4e-133 | 58 | 389 | 1 | 324 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 eel++rmwkd+++lkrlker+k + ++ a++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++r Vang0021ss00670.2 58 EELERRMWKDRIKLKRLKERQKLAI--QQ-AAEKQKPRQSTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIR 146 8*********************877..44.489*********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHH CS EIN3 93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgel 184 aWWkekv+fd+ngpaai+ky+a++l++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww++l Vang0021ss00670.2 147 AWWKEKVKFDKNGPAAIAKYEAECLAMSEADNS--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQL 236 ****************************99988..78999999************************************************* PP T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XX CS EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........sl 267 l++ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ + Vang0021ss00670.2 237 NLPHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGtsgvtgmlpGV 327 ******9.9**********************************************************************4445688777645 PP XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXX. CS EIN3 268 rkqspkvtlsceqkedvegkkeskikhvqavktta.....gfpvvrkrkkkpsesakvsske 324 ++++ s+ +++dv+g+++ + +++++++ + pv+ +r +k +e++ s+++ Vang0021ss00670.2 328 PAENKQAATSSASNYDVDGTDDGIGSVSSKEDRRIqivetEPPVNPRRVRKHVEDRDQSKQR 389 5588888999999*****55555544444433333445546677777777777766666554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 8.1E-127 | 58 | 305 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.4E-71 | 180 | 313 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 6.28E-62 | 186 | 309 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 626 aa Download sequence Send to blast |
MGTSCWLWGF QSDMLCQIVN YNSTEESVLG GSSDLEVDDI RCPNIAEKDV SDEEIEAEEL 60 ERRMWKDRIK LKRLKERQKL AIQQAAEKQK PRQSTDQARR KKMSRAQDGI LKYMLKLMEV 120 CKARGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEAEC LAMSEADNSR 180 NGNSQSILQD LQDATLGSLL SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWSQLNLPH 240 GQSPPYKKPH DLKKMWKVGV LTAVIKHMSP NIAKIRRHVR QSKCLQDKMT AKESAIWLGV 300 LSREEALIRQ PSSDNGTSGV TGMLPGVPAE NKQAATSSAS NYDVDGTDDG IGSVSSKEDR 360 RIQIVETEPP VNPRRVRKHV EDRDQSKQRP RKLRMTSRTV DKPPAQSDNE VLHAEPRSKG 420 LNIIQTGAEV VRIQIHGNEQ SNETDSTARP LEKELEVPAQ LPAPEFDHYS YLHTNNLIST 480 ESIYTSGRPI HYPELQNPDM QHEPTYNLYN PAAGYDPGHR QQLHPGNNSE GRPEIDAVHV 540 QAVHIKGDEI TGGDLQYFGK DAFQNELDRP IDHSFFGSPL SSMSLDFGGL NSPLHLDDFL 600 GITKIPVPVA YLGKGSQISI CVYGV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 4e-73 | 185 | 316 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0021ss00670.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017425435.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A0S3SG82 | 0.0 | A0A0S3SG82_PHAAN; Uncharacterized protein | ||||
STRING | XP_007150399.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 0.0 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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