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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang0010ss03200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
FAR1 |
| Protein Properties |
Length: 256aa MW: 28836.3 Da PI: 5.6932 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang0010ss03200.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 92.7 | 4.6e-29 | 91 | 178 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fYn+YA++vGF vr+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a+++v+k ++gkw+vtkl++eH+H+l+p
Vang0010ss03200.1 91 FYNAYATDVGFIVRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMIMVRKVSSGKWVVTKLVKEHTHPLTP 178
******************************************9988..9**************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MDSFVAAVEF EIDGTGETVA NAAIDEISSV ADDNREGESI EPNYKQDEGD NLAQDSSGIT 60
IPFAIPTVSV VAVEEPYVGQ EFESESAAQA FYNAYATDVG FIVRVSKLSR SRRDGTAIGR 120
ALVCNKEGFR MPDKREKIVR QRAETRVGCR AMIMVRKVSS GKWVVTKLVK EHTHPLTPGK 180
GRRDFVYEQY PNEHDKIREL SQQLACEKKR SATYKRHLEL IFEHIEEHNE SLSKKIQHIV 240
DSVREMETKE QQSQL*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
