 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang0010ss01910.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
LBD |
| Protein Properties |
Length: 246aa MW: 27187.8 Da PI: 6.8558 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang0010ss01910.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 135.7 | 1.7e-42 | 79 | 178 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da++s+vyeA ar+rdPvyG++g i +lq+q+++l+a
Vang0010ss01910.1 79 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQA 170
7******************************************************************************************* PP
DUF260 93 elallkee 100
+la+ ++e
Vang0010ss01910.1 171 QLAKSQAE 178
***99987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
PSHKHTLFFF LSFFVSLKHD TTREQKHTKE QTNKQTRLET EMESSDTYTP TSSAPLSHSP 60
TSSSSSPPPP PPPTVVMSPC AACKILRRRC AEKCVLAPYF PPTEPAKFTI AHRVFGASNI 120
IKFLQELPES QRADAVTSMV YEASARIRDP VYGCAGAICQ LQKQVNELQA QLAKSQAELV 180
TMQLQQANLV ALICMEMAQS PQESPQQSVD NFISTPPHTG GYQSGVNNFF EENTSPNSLW 240
EPLWT*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
