 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vang0010ss01310.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
C2H2 |
| Protein Properties |
Length: 198aa MW: 21984.1 Da PI: 4.8106 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang0010ss01310.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.5 | 0.0001 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C + Fs+ L H++ H
Vang0010ss01310.1 31 YECNFCRRGFSNAQALGGHMNIH 53
99*******************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0051973 | Biological Process | positive regulation of telomerase activity |
| GO:0003676 | Molecular Function | nucleic acid binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MESDHDQQAA ISENPSDGED QGATHVTSRS YECNFCRRGF SNAQALGGHM NIHRKDKAKL 60
KQQQSSNQPS LDKVIPPQDQ TKSGEERNTP KWNWNVSQEE HASSRASHTR QQLPLFEESP 120
TSSETLKPQG QNTTDGALLS TRDSSLKLDL ELRLGLEPQD SSPETVGYVS VTTFCLATFD 180
LHEEIVYLVP MCTGEFF*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
