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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0004ss00310.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
G2-like |
Protein Properties |
Length: 342aa MW: 38721.2 Da PI: 7.4263 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0004ss00310.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 100.4 | 1.2e-31 | 196 | 251 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a+e+LGGs+ AtPk+i+elm v+gLt+++vkSHLQkYRl+
Vang0004ss00310.1 196 KQRRCWSPELHHRFVKALEELGGSQAATPKQIRELMRVDGLTNDEVKSHLQKYRLH 251
79****************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MPATGCPCSR NFSPDWNLNW SRSKRSNASF LSASISALKE ELAKCRAFKA EPVLEEFIPL 60 KREYEEKEDN EKEEECRNKN DWVSSFQLWN TEDEAYNRSK ACRLEQKQKK SKGEERKSME 120 KDYFQHDSNR NVERGFVMPL STYLATEEEC VVDGLSLKTP ATAVKNTREG RGSRISSCRV 180 VSSAPSPMLL PQSGRKQRRC WSPELHHRFV KALEELGGSQ AATPKQIREL MRVDGLTNDE 240 VKSHLQKYRL HTRRVPAATA ANCSISGADL GGLWMHKESL KGTSYCSPQG PLQFATQSGD 300 TTSTTEGDNM IDDDIKLEEF HIYSRTTHDY IKEDGSSERG F*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 1e-13 | 196 | 249 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-13 | 196 | 249 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-13 | 196 | 249 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-13 | 196 | 249 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |