 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Traes_7DL_82722EDAD.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
HSF |
| Protein Properties |
Length: 128aa MW: 14305.5 Da PI: 11.8277 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_7DL_82722EDAD.2 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 31 | 6.6e-10 | 1 | 21 | 40 | 60 |
THHHHSTT--HHHHHHHHHHT CS
HSF_DNA-bind 40 vLpkyFkhsnfaSFvRQLnmY 60
+Lp +Fkh+nf+SFvRQLn+Y
Traes_7DL_82722EDAD.2 1 MLPAHFKHNNFSSFVRQLNTY 21
599****************** PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 128 aa
Download sequence Send
to blast |
MLPAHFKHNN FSSFVRQLNT YVSQLIPTRS VGLPQGGSGP VGVRXXXXXX XXXXXXXXXX 60
XXXXXXXXXX XXXXXXXXWP HRRRHDHGRH GGGEAEEGAE HHRRQGGRHV APRAGDGAEA 120
QADARVPP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF234653 | 1e-74 | KF234653.1 Triticum aestivum heat shock factor C2a (HsfC2a) mRNA, complete cds. |
