 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Traes_7AS_D9A440FE2.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
ERF |
| Protein Properties |
Length: 71aa MW: 8085.22 Da PI: 10.1077 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_7AS_D9A440FE2.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 32.9 | 1.7e-10 | 1 | 35 | 18 | 55 |
AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
eIrdp++ r++lg++ +aeeAa+a++ +++++g
Traes_7AS_D9A440FE2.1 1 EIRDPRK---GVRVWLGTYNSAEEAARAYDVEARRIRG 35
7999843...4************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ689809 | 1e-115 | KJ689809.1 Triticum turgidum subsp. durum ethylene response factor 1 short form L (ERF1) mRNA, complete cds. |
| GenBank | KJ689812 | 1e-115 | KJ689812.1 Triticum turgidum subsp. durum ethylene response factor 1 (ERF1) gene, complete cds. |
| GenBank | KJ689813 | 1e-115 | KJ689813.1 Triticum turgidum subsp. durum ethylene response factor 1 short form P (ERF1) gene, complete cds. |
| Publications
? help Back to Top |
- Kim CY, et al.
Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
[PMID:10755311] - Koo SC, et al.
OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
[PMID:19607808] - Iwamoto M,Takano M
Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
Biotechnol. Lett., 2011. 33(1): p. 173-8
[PMID:20872166] - Brenchley R, et al.
Analysis of the bread wheat genome using whole-genome shotgun sequencing.
Nature, 2012. 491(7426): p. 705-10
[PMID:23192148] - Serra TS, et al.
OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
Plant Mol. Biol., 2013. 82(4-5): p. 439-55
[PMID:23703395] - Jisha V, et al.
Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
PLoS ONE, 2015. 10(6): p. e0127831
[PMID:26035591] - Lourenço TF, et al.
The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
Plant Physiol., 2015. 169(3): p. 2275-87
[PMID:26381316]
|
