PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_D9A440FE2.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 71aa    MW: 8085.22 Da    PI: 10.1077
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_D9A440FE2.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.91.7e-101351855
                    AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           eIrdp++     r++lg++ +aeeAa+a++  +++++g
  Traes_7AS_D9A440FE2.1  1 EIRDPRK---GVRVWLGTYNSAEEAARAYDVEARRIRG 35
                           7999843...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003809.4E-16149IPR001471AP2/ERF domain
PROSITE profilePS5103215.949143IPR001471AP2/ERF domain
CDDcd000182.85E-19144No hitNo description
Gene3DG3DSA:3.30.730.109.3E-21145IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-13144IPR016177DNA-binding domain
PfamPF008473.7E-5635IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    Send to blast
EIRDPRKGVR VWLGTYNSAE EAARAYDVEA RRIRGKKAKV NFPEEAPMAP QQRCATSVKV  60
PEFNTEQKPV L
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ6898091e-115KJ689809.1 Triticum turgidum subsp. durum ethylene response factor 1 short form L (ERF1) mRNA, complete cds.
GenBankKJ6898121e-115KJ689812.1 Triticum turgidum subsp. durum ethylene response factor 1 (ERF1) gene, complete cds.
GenBankKJ6898131e-115KJ689813.1 Triticum turgidum subsp. durum ethylene response factor 1 short form P (ERF1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183034.11e-41ethylene-responsive transcription factor 1-like
SwissprotQ6K7E61e-26ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBLA0A446X5I21e-42A0A446X5I2_TRITD; Uncharacterized protein
TrEMBLA0A446Y5G91e-42A0A446Y5G9_TRITD; Uncharacterized protein
TrEMBLA0A446Y5I31e-42A0A446Y5I3_TRITD; Uncharacterized protein
STRINGTraes_7AS_D9A440FE2.13e-45(Triticum aestivum)
STRINGTRIUR3_28474-P14e-43(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.13e-23ERF family protein
Publications ? help Back to Top
  1. Kim CY, et al.
    Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
    Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
    [PMID:10755311]
  2. Koo SC, et al.
    OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
    Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
    [PMID:19607808]
  3. Iwamoto M,Takano M
    Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
    Biotechnol. Lett., 2011. 33(1): p. 173-8
    [PMID:20872166]
  4. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  5. Serra TS, et al.
    OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
    Plant Mol. Biol., 2013. 82(4-5): p. 439-55
    [PMID:23703395]
  6. Jisha V, et al.
    Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
    PLoS ONE, 2015. 10(6): p. e0127831
    [PMID:26035591]
  7. Lourenço TF, et al.
    The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
    Plant Physiol., 2015. 169(3): p. 2275-87
    [PMID:26381316]