PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7AS_D9A440FE2.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 71aa MW: 8085.22 Da PI: 10.1077 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.9 | 1.7e-10 | 1 | 35 | 18 | 55 |
AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 eIrdp++ r++lg++ +aeeAa+a++ +++++g Traes_7AS_D9A440FE2.1 1 EIRDPRK---GVRVWLGTYNSAEEAARAYDVEARRIRG 35 7999843...4************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 9.4E-16 | 1 | 49 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.949 | 1 | 43 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.85E-19 | 1 | 44 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 9.3E-21 | 1 | 45 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.31E-13 | 1 | 44 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.7E-5 | 6 | 35 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 71 aa Download sequence Send to blast |
EIRDPRKGVR VWLGTYNSAE EAARAYDVEA RRIRGKKAKV NFPEEAPMAP QQRCATSVKV 60 PEFNTEQKPV L |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ689809 | 1e-115 | KJ689809.1 Triticum turgidum subsp. durum ethylene response factor 1 short form L (ERF1) mRNA, complete cds. | |||
GenBank | KJ689812 | 1e-115 | KJ689812.1 Triticum turgidum subsp. durum ethylene response factor 1 (ERF1) gene, complete cds. | |||
GenBank | KJ689813 | 1e-115 | KJ689813.1 Triticum turgidum subsp. durum ethylene response factor 1 short form P (ERF1) gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020183034.1 | 1e-41 | ethylene-responsive transcription factor 1-like | ||||
Swissprot | Q6K7E6 | 1e-26 | ERF1_ORYSJ; Ethylene-responsive transcription factor 1 | ||||
TrEMBL | A0A446X5I2 | 1e-42 | A0A446X5I2_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446Y5G9 | 1e-42 | A0A446Y5G9_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446Y5I3 | 1e-42 | A0A446Y5I3_TRITD; Uncharacterized protein | ||||
STRING | Traes_7AS_D9A440FE2.1 | 3e-45 | (Triticum aestivum) | ||||
STRING | TRIUR3_28474-P1 | 4e-43 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 3e-23 | ERF family protein |