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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_6DS_17B737547.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
HD-ZIP |
Protein Properties |
Length: 225aa MW: 24759.7 Da PI: 8.353 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_6DS_17B737547.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59 | 7.6e-19 | 106 | 160 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++t eq Lee F+ ++ +s+ e+ +LA++lgL+ rqV vWFqNrRa+ k
Traes_6DS_17B737547.1 106 RKKLRLTVEQAALLEESFRAHNVLSHGEKHDLARQLGLKPRQVEVWFQNRRARTK 160
778899***********************************************98 PP
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2 | HD-ZIP_I/II | 112.8 | 2.1e-36 | 106 | 191 | 1 | 86 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86
+kk+rl+ eq++lLEesF++++ L++ +K++lar+Lgl+prqv+vWFqnrRARtk+kq+E d+e L+r++++l+++n+rL++e +e
Traes_6DS_17B737547.1 106 RKKLRLTVEQAALLEESFRAHNVLSHGEKHDLARQLGLKPRQVEVWFQNRRARTKLKQTELDCELLRRWCERLSDDNARLRRELAE 191
69*******************************************************************************99865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MSSLTTISSG AMEESQEVEE LVDTRLSLVI GAASRPPPTV LALLPATSPE NEAAARRKRK 60 GQENGAGGVA ATSRQHSKRA KTVHDSSDVD DDDDDGGDAA RSDGTRKKLR LTVEQAALLE 120 ESFRAHNVLS HGEKHDLARQ LGLKPRQVEV WFQNRRARTK LKQTELDCEL LRRWCERLSD 180 DNARLRRELA ETLSSSPAFL SRLTMANDKA VCSSCNKLTS ARMPA
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 104 | 110 | TRKKLRL |
2 | 154 | 162 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |