 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_6DL_EAF038D23.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
G2-like |
| Protein Properties |
Length: 306aa MW: 33746.5 Da PI: 8.8926 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_6DL_EAF038D23.2 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.6 | 1.4e-33 | 23 | 77 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYR+
Traes_6DL_EAF038D23.2 23 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRM 77
79****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MFEGMERAGY GVGAGVVLSR DPKPRLRWTP DLHERFVEAV TKLGGPDKAT PKSVLRLMGM 60
KGLTLYHLKS HLQKYRMGKQ SKKDTGFETN RGAFAAQGIS FSSAVPPNVP SAGNSNMGKF 120
YTDITKCWIS PVKEKCCISL SIPNQFIETP LADALRYQIE VQRKLHEQLE VQKKLQMRIE 180
AQGKYLQTIL EKAQKNLSYE AGGDATLETT RSQLTDFNLA LSGFMDDATQ ACQQNGGELA 240
KALSDDGLRA GNLGFQLYHG GDDVKCATDE DLLLLDLNIK GGYDHRLSAH GMPRGAVDLT 300
VGQHRR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK356926 | 0.0 | AK356926.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1042E14. |
| GenBank | AK366041 | 0.0 | AK366041.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2039P18. |
