PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6BS_65CDD608F.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 238aa    MW: 26256.6 Da    PI: 10.7173
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6BS_65CDD608F.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.9e-12138169334
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                            + k  rr+++NReAAr+sR+RKka+i++Le+ 
  Traes_6BS_65CDD608F.2 138 DAKTLRRLAQNREAARKSRLRKKAYIQNLETS 169
                            67999************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-6136212IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-9136182No hitNo description
PROSITE profilePS502178.76138182IPR004827Basic-leucine zipper domain
PfamPF001702.9E-9139170IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-7140178No hitNo description
PROSITE patternPS000360143158IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
AGFLFSPRRD DPSFYRCYLV HPWKHHERTL ADTRTWQNLI KPSSSTSTAR TNNQFKNNHK  60
LSTSSLLGRC TSSPSLXXXX XXXXXXXASS NLKPQRPPSK QSAMTAPGGK AAVKREGSGS  120
GGAGTPSTSE HEGPRTPDAK TLRRLAQNRE AARKSRLRKK AYIQNLETSR VRLSHMEQEM  180
QRCSAQGAIL GGGAGIGGLS PEAAWFDGEY ARWVDEHDRM MRHLRAAVDA EGVEHDAA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689310.0AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178470.11e-101transcription factor TGAL9-like isoform X3
RefseqXP_020178471.11e-101transcription factor TGAL9-like isoform X4
SwissprotQ0E3425e-53TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBLA0A3B6PK921e-101A0A3B6PK92_WHEAT; Uncharacterized protein
TrEMBLA0A446W9351e-101A0A446W935_TRITD; Uncharacterized protein
STRINGTraes_6BS_65CDD608F.21e-166(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.34e-26bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]