PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AS_6AAA7678C.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 84aa    MW: 9334.64 Da    PI: 7.8372
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AS_6AAA7678C.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY49.12.2e-15535132162
                  YABBY 132 fikeeiqrikasnPdishreafsaaaknWah 162
                             ++eeiqrika+ Pdi hreafs+aaknWa 
  Traes_6AS_6AAA7678C.1   5 ALREEIQRIKAAKPDIPHREAFSMAAKNWAK 35 
                            689***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046905.6E-14636IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
SCCCALREEI QRIKAAKPDI PHREAFSMAA KNWAKCDPRC SSTVSASNSA PEPRIVVPGP  60
QLQERATEQV VESFDIFKQM ERSA
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB4702691e-131AB470269.1 Triticum aestivum TaDL mRNA for DL related protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156144.15e-49protein DROOPING LEAF-like isoform X1
RefseqXP_020156145.15e-49protein DROOPING LEAF-like isoform X2
SwissprotQ76EJ02e-34YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A452XAX62e-49A0A452XAX6_AEGTS; Uncharacterized protein
STRINGTraes_6AS_6AAA7678C.19e-55(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59513657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.16e-14YABBY family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]