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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_6AS_52AE4A6E2.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
Trihelix |
Protein Properties |
Length: 199aa MW: 21369.1 Da PI: 6.2372 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_6AS_52AE4A6E2.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 100.6 | 1.3e-31 | 6 | 91 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+k+ev aLi++r+ +++r+++ lk+plWeevs++m++ g+ rs+k+Ckekwen+nk+++k ke+ kkr + + +tcpyfd+l+
Traes_6AS_52AE4A6E2.1 6 RWPKHEVEALIRVRSGLDNRFQEPGLKGPLWEEVSARMAAAGYgGRSAKRCKEKWENINKYFRKAKESGKKR-PAHAKTCPYFDELD 91
8******************************************99*************************98.99999*******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MSSSSRWPKH EVEALIRVRS GLDNRFQEPG LKGPLWEEVS ARMAAAGYGG RSAKRCKEKW 60 ENINKYFRKA KESGKKRPAH AKTCPYFDEL DRLYSRSGHG SGASSGAGNT SAKATANAIA 120 TADDAANKAS SELLDAVVKY PTDTHYGPPP GFPNDGKEDG AAQHDGEGDV DMGRASGRAG 180 EDHDDEAGQS HGHDDDDDH
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK357866 | 1e-147 | AK357866.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1063K18. |
GenBank | AK369025 | 1e-147 | AK369025.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2083O21. |
GenBank | AK374271 | 1e-147 | AK374271.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3059B02. |