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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_6AL_7A4395C60.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
Trihelix |
Protein Properties |
Length: 216aa MW: 22625.2 Da PI: 10.2745 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_6AL_7A4395C60.2 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 47.6 | 4.4e-15 | 64 | 145 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
W++ + +Li+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +k+ + + ++p+fd+l
Traes_6AL_7A4395C60.2 64 WSDGATSTLIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYSKppkSDVQCKNRIDTLKKKYKVEKAKSDS-------SWPFFDRL 144
*************************************87889976333778***************9998886.......5*****99 PP
trihelix 86 e 86
+
Traes_6AL_7A4395C60.2 145 D 145
7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MDDDGAASPS PSPSPSRSPS PLPVADPVTV AAVPPGHLAL AIPIHKHGPS SSGGGGGGGR 60 EDAWSDGATS TLIDAWGERF VALGRGSLRH PQWQEVAEVV SSRDGYSKPP KSDVQCKNRI 120 DTLKKKYKVE KAKSDSSWPF FDRLDFLLAP VQKLLGNSGG AAGNFGSSNP SNRSTAPMAP 180 RVNFPQRTRT AFPSIGMKRR LPSPPQASAS SESSDG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK363202 | 0.0 | AK363202.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013H02. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G14180.1 | 1e-34 | sequence-specific DNA binding transcription factors |