PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_591F8EFBD.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 193aa    MW: 21582 Da    PI: 6.9623
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_591F8EFBD.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.53e-1390145358
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                            e +r rr+ +NRe+ArrsR RK+ ++ eL  +v+ L + N++L +el++    +  
  Traes_5DL_591F8EFBD.1  90 EERRRRRMVSNRESARRSRMRKQRQLSELWARVAHLRGANRRLLDELNRAMRSCGD 145
                            67899*******************************************98887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-987145No hitNo description
SMARTSM003383.6E-1388152IPR004827Basic-leucine zipper domain
PfamPF001701.2E-1089144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.64590153IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.89E-1092141No hitNo description
PROSITE patternPS00036095110IPR004827Basic-leucine zipper domain
CDDcd147029.37E-1697143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MLHHYHHGEV ASLHCLSPPN PPFHTHYHHP GMIAASMTPP PPFHFSPAAY EYEDEPILQE  60
ALAAIGDNSP PGSGGADDIH GQVLASAAEE ERRRRRMVSN RESARRSRMR KQRQLSELWA  120
RVAHLRGANR RLLDELNRAM RSCGDVRRDN DRLGAEKAEL EARLEQLMQQ AQQSTKSSEP  180
CEENTTAAAA AAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104111RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0043762e-74AP004376.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0481F05.
GenBankAP0045572e-74AP004557.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0028A08.
GenBankAP0149642e-74AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence.
GenBankCP0126162e-74CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence.
GenBankCT8315042e-74CT831504.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115A07, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191878.11e-127basic leucine zipper 43-like
TrEMBLA0A3B6MRS81e-139A0A3B6MRS8_WHEAT; Uncharacterized protein
STRINGTraes_5DL_591F8EFBD.11e-139(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38800.18e-10basic leucine-zipper 43
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]