PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 341aa MW: 38260.8 Da PI: 5.9406

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_5DL_0924913F8.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.6e-50	36	168	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg Traes_5DL_0924913F8.1 36 LPGYRFHPTDEELVTFYLRRKVARKSLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGI 122 69*************************.99***********445556889**************************** PP NAM 89 dkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ +g +glkk+Lv+y+g+a kg+ktdW+mhe+rl Traes_5DL_0924913F8.1 123 DRPIYSAgsggasSGVSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 168 **98877766667*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-55	34	193	IPR003441	NAC domain
PROSITE profile	PS51005	54.237	35	194	IPR003441	NAC domain
Pfam	PF02365	1.3E-24	37	168	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005992	Biological Process	trehalose biosynthetic process
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006561	Biological Process	proline biosynthetic process
GO:0009718	Biological Process	anthocyanin-containing compound biosynthetic process
GO:0010120	Biological Process	camalexin biosynthetic process
GO:0042538	Biological Process	hyperosmotic salinity response
GO:1900056	Biological Process	negative regulation of leaf senescence
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MVAKAEMSAM ELEKVMSDGE VVLGGAGDEE EEDVVLPGYR FHPTDEELVT FYLRRKVARK 60 SLRIEVIREM DIYKHDPWDL PKASTVGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT 120 GIDRPIYSAG SGGASSGVSI GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP AAATNSSPSM 180 QEAEVWTICR IFRRTITYRK QQTWRPVPAP SVADSNSNTG SFESSEAGDE YMNCLQAPAA 240 PCIPQQQYVS QVGTVDSGNF FYEDNMHNQQ FQGQWNAAPA APVPEQKLQS PLSTAVSFHQ 300 NDHSHAVAAN DFYKVEGYLE EIARMMEVTD PTGFYDYRSY G

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-48	37	200	19	171	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-48	37	200	19	171	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-48	37	200	19	171	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-48	37	200	19	171	NO APICAL MERISTEM PROTEIN
4dul_A	4e-48	37	200	19	171	NAC domain-containing protein 19
4dul_B	4e-48	37	200	19	171	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269\|PubMed:22345491}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00310	DAP	Transfer from AT2G43000	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269\|PubMed:22345491}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK360432	0.0	AK360432.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1118B07.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020195561.1	0.0	transcription factor JUNGBRUNNEN 1-like
Swissprot	Q9SK55	1e-84	NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBL	A0A453LXW0	0.0	A0A453LXW0_AEGTS; Uncharacterized protein
STRING	EMT06992	0.0	(Aegilops tauschii)
STRING	Traes_5DL_0924913F8.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1191	38	129

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	5e-80	NAC domain containing protein 42

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] Shahnejat-Bushehri S, et al. Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] Ebrahimian-Motlagh S, et al. JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]