PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5BL_C559EFC8A.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 193aa MW: 21611.1 Da PI: 7.419 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.2 | 3.5e-13 | 91 | 146 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 e +r rr+ +NRe+ArrsR RK+ ++ eL +v+ L + N++L +el++ + Traes_5BL_C559EFC8A.1 91 EERRRRRMVSNRESARRSRMRKQRQLSELWARVAHLRGANRRLLDELNRAMRSCGD 146 67899*******************************************98887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-13 | 89 | 153 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-9 | 89 | 146 | No hit | No description |
Pfam | PF00170 | 1.2E-10 | 90 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.645 | 91 | 154 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.21E-10 | 93 | 142 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 96 | 111 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.56E-16 | 98 | 144 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MLHHYHHGEV ASLHCLSPPN PPFHTHYHHP GMIAAGMTPP PPFHFSPAAY EYEDEPMLQE 60 ALAAIGNNSP PGSGGAGDDI HGQVLASAAE EERRRRRMVS NRESARRSRM RKQRQLSELW 120 ARVAHLRGAN RRLLDELNRA MRSCGDVRRD NDRLSAEKAE LEARLEQLMQ QAQQSNNASS 180 EPCEKNTTVA AAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 105 | 112 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP004376 | 7e-77 | AP004376.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0481F05. | |||
GenBank | AP004557 | 7e-77 | AP004557.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0028A08. | |||
GenBank | AP014964 | 7e-77 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. | |||
GenBank | CP012616 | 7e-77 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. | |||
GenBank | CT831504 | 7e-77 | CT831504.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115A07, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020191878.1 | 1e-126 | basic leucine zipper 43-like | ||||
TrEMBL | A0A3B6LND0 | 1e-139 | A0A3B6LND0_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446UCN3 | 1e-139 | A0A446UCN3_TRITD; Uncharacterized protein | ||||
STRING | Traes_5BL_C559EFC8A.1 | 1e-140 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G04038.1 | 1e-08 | basic leucine-zipper 48 |
Publications ? help Back to Top | |||
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