PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_C08428870.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 532aa    MW: 59428 Da    PI: 7.4132
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_C08428870.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.4e-11211243133
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                            e++ k  rr+++NReAAr+sR+RKka+i++Le 
  Traes_5BL_C08428870.1 211 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLES 243
                            6777999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.6E-8209256No hitNo description
SMARTSM003380.0016211264IPR004827Basic-leucine zipper domain
PfamPF001704.0E-8212243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002213255IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.87E-7215256No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
PfamPF141441.4E-28318392IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MSEGQGQQQQ QEIIISQQQH QHQQQQQPLE MDITFGMSSH QHHHAPPSSS SSSSMHAAAA  60
SFMSGKEASG AYDHLGELDQ ALFMYLDHGH ASTQQEQRQT LNIFPSQPMH VEPSPKGELG  120
LVLSPAPVGS KMPSGRSSPD YHHQQQQQAA AAAMEELAAG SRRQQQEHHL HLQHQQQQPA  180
FATAESAGVS NNKDVKPLTK KEHKRGLSTG ERDPKTLRRL AQNREAARKS RLRKKAYIQQ  240
LESSRIRLAQ IEQELHSARA QGVLYPGSSL LAEQGIAGKG IGGIDGLSSA IIRSNWPAEA  300
AMFDVEYARW QEEHNRLMYE LRAALQQHLP EGELQMYVES CLAHHDEVLA IKDAVIKGDV  360
FHLISGVWRS PAERCFLWLG GFRPSEVIKM VLSHVEPLTE QQIVAVYGLQ QSAVQTEEAL  420
SQGLDTLYQA LSDTVVSDAL TCCSTPNVSN YMGQMGLAVH KLSVRQMLIK HAEKLRQQML  480
HRLHQVLTAR QMARSLLAVS DYFHRLRVLS SFWVNRNRMA PQDQQLEAGP HT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3666600.0AK366660.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2045H07.
GenBankAK3756510.0AK375651.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3100G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159963.10.0transcription factor TGA2-like isoform X1
SwissprotQ52MZ21e-151TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A446UDM00.0A0A446UDM0_TRITD; Uncharacterized protein
STRINGTraes_5BL_C08428870.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-130bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]