 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_5BL_6E13A3C8C.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
G2-like |
| Protein Properties |
Length: 451aa MW: 46023 Da PI: 7.4509 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_5BL_6E13A3C8C.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.8 | 4.4e-32 | 258 | 311 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Traes_5BL_6E13A3C8C.1 258 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 311
9****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009887 | Biological Process | organ morphogenesis |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009956 | Biological Process | radial pattern formation |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010158 | Biological Process | abaxial cell fate specification |
| GO:0010229 | Biological Process | inflorescence development |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MEASSAASPD LSLHISLPST GPPTGPGGGG GGRGPVGGGG GDPWRRLNGS TASTELSLSP 60
PLLAADQEGA ALPWRHRPSS SAAASSAATT SAQAALMTMP MLQPLDAGVG GASAAPPIRG 120
IPIYNGAGGF PFLPPAPGGG EGHHLPKVGF YSYHHPAAWP SSLGSTSPSS LGPGPAPPAN 180
SFDPTAAFLS SAAHHRMLSA SGRLNGMLSD TLRSYGAPGG GVGMGLGGHH HHLHGAQPFG 240
LGSRFMPKLP AKRSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA 300
HVKSHLQMYR TVKSTDKPAA SGPTDGGSGD DDFPSAGGQV GSGGDNNMCP RPFPEHRSTS 360
EGAASSVGGG GDMDQSSAGN ASTKWSNSSR DPWVSSNSCN MDAHRSIGLS SPMENMEPCR 420
STGSQVSNHE LSSPSLEFTL GRPDWHGADH D
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-16 | 259 | 313 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-16 | 259 | 313 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-16 | 259 | 313 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-16 | 259 | 313 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK377103 | 0.0 | AK377103.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3148F08. |
