PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5AL_E9FE08F07.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 48aa MW: 5492.17 Da PI: 11.1783 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.9 | 8.9e-12 | 10 | 44 | 1 | 38 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38 s+y+GV +++ +grW+A+I + g +k+ +lg++gt Traes_5AL_E9FE08F07.1 10 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGT 44 89****99**********99966...3.6*********9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 8.3E-8 | 10 | 44 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.77E-7 | 10 | 45 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-6 | 11 | 44 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 9.914 | 11 | 48 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 48 aa Download sequence Send to blast |
KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG TYGTYSTL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027121366.1 | 3e-25 | ethylene-responsive transcription factor WRI1-like | ||||
Refseq | XP_027174086.1 | 1e-25 | AP2-like ethylene-responsive transcription factor At1g79700 | ||||
Swissprot | Q94AN4 | 3e-24 | AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060 | ||||
TrEMBL | A0A068V5Q4 | 3e-24 | A0A068V5Q4_COFCA; Uncharacterized protein | ||||
STRING | XP_009360494.1 | 6e-24 | (Pyrus x bretschneideri) | ||||
STRING | PGSC0003DMT400036707 | 1e-24 | (Solanum tuberosum) | ||||
STRING | PGSC0003DMT400087745 | 5e-24 | (Solanum tuberosum) | ||||
STRING | Traes_5AL_E9FE08F07.1 | 2e-26 | (Triticum aestivum) | ||||
STRING | XP_004298447.1 | 6e-24 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.2 | 5e-22 | ARIA-interacting double AP2 domain protein |
Publications ? help Back to Top | |||
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