PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_7ED9D05C5.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 311aa    MW: 35938.1 Da    PI: 8.5684
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_7ED9D05C5.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.31.8e-3379833128
                    NAM  33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgekt 119
                            +i+ev+iyk++PwdLp k+  +e+ewyfFs+rd+ky++g r      sgyWkatg+dk++ls+  +e +g+kk Lvfy+g+ pkg+kt
  Traes_5AL_7ED9D05C5.1   7 IIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGAR-----XSGYWKATGTDKAILSTpANESIGVKKALVFYRGKPPKGVKT 89 
                            699*************8777899*************98754.....489************9988899******************** PP

                    NAM 120 dWvmheyrl 128
                            dW+mheyrl
  Traes_5AL_7ED9D05C5.1  90 DWIMHEYRL 98 
                            *******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100543.3631126IPR003441NAC domain
SuperFamilySSF1019411.28E-432126IPR003441NAC domain
PfamPF023653.3E-142298IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MPSPVPIIAE VNIYKCNPWD LPGKALFGEN EWYFFSPRDR KYPNGARXSG YWKATGTDKA  60
ILSTPANESI GVKKALVFYR GKPPKGVKTD WIMHEYRLTA ADNRTTKRRG SSMRLDDWVL  120
CRIHKKCNNL HNFSSSDQEQ EHEQESSTTV EDSHNNHTVS SPKSEXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXQ PPWQQTLHYN  240
NNNNGYVNID TIDVPQIPEA RVDDYGMNGD RYNGMKRKRS SGSLYCSQLQ LPADQYSGML  300
IHPFLSQQLH M
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-51412843170Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ0228430.0DQ022843.1 Triticum aestivum NAC domain transcription factor (NAC69-3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166974.11e-110NAC transcription factor 29-like
SwissprotK4BWV26e-60NAP1_SOLLC; NAC domain-containing protein 1
TrEMBLA0A446SXV21e-114A0A446SXV2_TRITD; Uncharacterized protein
TrEMBLM7ZU281e-115M7ZU28_TRIUA; NAC domain-containing protein 29
TrEMBLQ4U0D41e-114Q4U0D4_WHEAT; NAC domain transcription factor
STRINGTraes_5AL_7ED9D05C5.11e-171(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-58NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  3. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]