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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5AL_69590B897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 80aa MW: 9400.88 Da PI: 11.6329 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.2 | 2.3e-10 | 5 | 45 | 13 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 NR +A+rsR RK+++i eLe+ v L+ e +aL ++ l Traes_5AL_69590B897.1 5 NRQSAQRSRVRKLQYISELERSVTGLQMEVSALSPRVAFLD 45 ****************************9999987776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14703 | 1.25E-16 | 2 | 48 | No hit | No description |
SuperFamily | SSF57959 | 2.56E-10 | 3 | 51 | No hit | No description |
SMART | SM00338 | 0.0037 | 3 | 57 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-8 | 4 | 48 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-12 | 5 | 51 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 80 aa Download sequence Send to blast |
MILANRQSAQ RSRVRKLQYI SELERSVTGL QMEVSALSPR VAFLDHQRSL LTVQQPSQAK 60 NCRPCTRQDL QRWYRTFLPI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By white light. {ECO:0000269|PubMed:18065552}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003572005.1 | 2e-27 | basic leucine zipper 19 | ||||
Swissprot | Q6K3R9 | 3e-25 | BZP19_ORYSJ; Basic leucine zipper 19 | ||||
TrEMBL | A0A287R0Z5 | 2e-27 | A0A287R0Z5_HORVV; Uncharacterized protein | ||||
STRING | Traes_5AL_69590B897.1 | 1e-51 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 3e-25 | bZIP family protein |
Publications ? help Back to Top | |||
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