PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_39649C38E.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 325aa    MW: 35700.6 Da    PI: 8.6308
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_39649C38E.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-11133165133
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                            e++ k  rr+++NReAAr+sR+RKka+i++Le 
  Traes_5AL_39649C38E.1 133 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLES 165
                            6778999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-8131178No hitNo description
SMARTSM003388.7E-7133222IPR004827Basic-leucine zipper domain
PfamPF001702.1E-8134165IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002135177IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.17E-7137178No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
PfamPF141446.6E-29231305IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
LASSVPSISS LICPSLHLVH GCRDPQHLPL PADARGAITK GGAWPSPVAS ARGVEDAVAG  60
PPSPPAAAAX XXXXXXXXXX XGSRRQQQEH HLHLQHQQQQ PAFATAESAG VSNNKDVKPL  120
TKKEHKRGLS TGERDPKTLR RLAQNREAAR KSRLRKKAYI QQLESSRIRL AQIEQELHSA  180
RAQGVLYPGS SLLAEQGIAG KGLGGIDGLS SEAAMFDVEY ARWQEEHNRL MYELRAALQQ  240
HLPEGELQMY VESCLAHHDE VLAIKDAVIK GDVFHLISGV WRSPAERCFL WLGGFRPSEV  300
IKMVLSHVDP LTEQQIVAVY GLQQS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3666600.0AK366660.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2045H07.
GenBankAK3756510.0AK375651.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3100G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159964.11e-160transcription factor TGA2-like isoform X2
SwissprotQ52MZ23e-86TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A453L4T31e-175A0A453L4T3_AEGTS; Uncharacterized protein
STRINGTraes_5AL_39649C38E.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.28e-85bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]