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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_5AL_16AD8DEEC.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
HSF |
Protein Properties |
Length: 269aa MW: 30854.4 Da PI: 5.8879 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_5AL_16AD8DEEC.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 63 | 7.3e-20 | 1 | 52 | 42 | 102 |
HHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
HSF_DNA-bind 42 pkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
p+yFkh nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+++ll++ikr+k
Traes_5AL_16AD8DEEC.1 1 PRYFKHGNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLLRNIKRRKP 52
68***********************999.........**********************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
PRYFKHGNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ RHLLRNIKRR KPTHGSQNQQ 60 SLGSYLEVGN FGHDVEIDHL KRDRQLLMAE VVKLRQEQQN TRSDLQAMEK RLQGTEQKQQ 120 QMMSFLARVM QNPMFIHHLL SQSEMRKELE DAISNKRRRR IDQGPEAVDS MGTGSTLEQG 180 SQVMFEQQEP VDSLVNGVIS DLESSSVDTK GAEVQQSVAS SRSEQLRGRP SGELNDDFWE 240 DLLHEGGLGE EASNLVVPDD MNLLAEKLD
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator expressed upon environmental stress that specifically binds DNA of heat shock promoter elements (HSE). Involved in heat stress response. {ECO:0000269|PubMed:18064488}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat stress. {ECO:0000269|PubMed:18064488}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK358148 | 0.0 | AK358148.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1069P04. |