 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_4DS_FEAA10316.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
GRAS |
| Protein Properties |
Length: 526aa MW: 58148.6 Da PI: 12.3636 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_4DS_FEAA10316.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 192.2 | 3.3e-59 | 308 | 526 | 155 | 374 |
GRAS 155 keeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvv 242
+ +l +t rL++fA+ lgv+fef + + + +++l+ ++++v+p+E++aVn++lql++ll ++++++ +++L+l ksl P vv++
Traes_4DS_FEAA10316.1 308 AASLAATSARLRDFAQLLGVDFEFVP-LLRPVHELDRSDFSVEPDEVVAVNFMLQLYHLL---GDSDEPVRRLLRLAKSLGPAVVTLG 391
578999********************.599******************************...66666777***************** PP
GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvpl 329
e e+++n++ F++rf++al+yy a+f+sl++ ++r+se+r+++Er ++g++i+ +v ega+r+ r+ ++W++ +e +GF+pv+l
Traes_4DS_FEAA10316.1 392 EYEVSLNRAGFVDRFASALSYYRAVFESLDVAMARDSEDRATLERCMFGERIRRAVGpPEGADRTDRMAGSAEWQALMEWCGFEPVRL 479
********************************************************83699*************************** PP
GRAS 330 sekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
s++a++qa+lll ++ + y++ + +++ l W++rpL++vSaWr
Traes_4DS_FEAA10316.1 480 SNYAESQAELLLWDYDaKYKYSLVQLPPAFLsLAWEKRPLLTVSAWR 526
****************8888999999998888**************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 526 aa
Download sequence Send
to blast |
SSSSSSTTSS SSGTTTTTTT SSRRPCRCRP PPRPRTRRSR ARCRSGPRGP RRGPRPRTSS 60
LTSSGRPPPT PCSPTSPPAR TSTPTCGWRA SSGTPPCSRT RTSTASSSPP RRRPARPRLR 120
PRRRPSRGTR MRRPRSPRLP PRRRRRVLLR AQPTRPAPPP SSSPSSPAPA PRWPAQASPP 180
RSSPRSAPRP PSPGTPRSAW PSTSPTLSLA ASRAAARRPS RRRPTRGSPP TRSRSATRRS 240
TTPAPTPSSR TSPPTRPSWR PRARRPRSTS LTSASCRASS GXXXXXXXXX XXXXXXXXXX 300
XXLGPQPAAS LAATSARLRD FAQLLGVDFE FVPLLRPVHE LDRSDFSVEP DEVVAVNFML 360
QLYHLLGDSD EPVRRLLRLA KSLGPAVVTL GEYEVSLNRA GFVDRFASAL SYYRAVFESL 420
DVAMARDSED RATLERCMFG ERIRRAVGPP EGADRTDRMA GSAEWQALME WCGFEPVRLS 480
NYAESQAELL LWDYDAKYKY SLVQLPPAFL SLAWEKRPLL TVSAWR
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 49 | 54 | PRRGPR |
| 2 | 137 | 146 | RLPPRRRRRV |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK353654 | 0.0 | AK353654.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1001N07. |
