PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4DS_0521C8ABF.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 332aa    MW: 36695.7 Da    PI: 7.3446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4DS_0521C8ABF.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1377.6e-122654533
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                           k +rr+++NReAAr+sR+RKka+i++Le 
  Traes_4DS_0521C8ABF.1 26 KTTRRLAQNREAARKSRLRKKAYIQQLES 54
                           789************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-72285IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0712468IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.56E-72567No hitNo description
PfamPF001701.2E-82662IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.7E-82770No hitNo description
PROSITE patternPS0003602944IPR004827Basic-leucine zipper domain
PfamPF141442.9E-30106180IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MVACHVQKMA TSSTHSDRTG KAVDPKTTRR LAQNREAARK SRLRKKAYIQ QLESGKLKLA  60
QLEQDLQRAR SQGLLVGGAP GGNSSPGAAM FDVEYNRWLD DDSRRMIELR GGLHAHLPDG  120
DLRAIIDDTL THYDELFRLK SAAARADVFH LITGMWATPA ERCFLWMGGF RPSDLLKTLA  180
PQLDPLTEQQ MVGICSLEQS LQQAEEALTQ GLEQLHQSLA ITVAGSGSLS DDTNMGSFMG  240
DMAVALGKLA NLEGFVIQAD NLRQQTLHQM HRILTVRQAA RCFLAIGEYH NRLRALSSLW  300
ASRPREILMT DEGNCGELSI AAHPAESQYS AY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3702880.0AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146200.10.0transcription factor TGAL4-like isoform X1
RefseqXP_020146201.10.0transcription factor TGAL4-like isoform X2
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A446RZG70.0A0A446RZG7_TRITD; Uncharacterized protein
STRINGTraes_4DS_0521C8ABF.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-139bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  4. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]