|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Traes_4DL_21C202E37.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
Family |
GeBP |
Protein Properties |
Length: 345aa MW: 37894.5 Da PI: 5.1784 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_4DL_21C202E37.1 | genome | IWGSC | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 107.9 | 7.1e-34 | 64 | 163 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehd 85
lfqrlw+eeDeiv+L+++ +f+a++g+ +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+
Traes_4DL_21C202E37.1 64 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHE 151
79*************************9977778***************************************8889*********** PP
DUF573 86 qkifelskkiWg 97
q +fe+++ iW+
Traes_4DL_21C202E37.1 152 QAVFEIARNIWR 163
***********8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MLPMVDDPSA AGAAASSSFP DADAYGNGDS EDIDFPVDPI PNPPFSAGPP PASATATVGE 60 RRPLFQRLWT EEDEIVILRA FAEFTAQRGT AFASHQYDTE PFYEEMRRRL QLDFSKSQLA 120 EKLRRLKRKY RNCVERLRCS GNTFSFRSPH EQAVFEIARN IWRPSSDKHG RDPNAADSED 180 DATITATNAA ANGDAKSPSS SKAHRRGRRR RTADLAADAS EAPQPYTSGP MPVKTEDSLP 240 AFFPHVSMDG AEPVVAPVVN TESSVLTPLF KEMVRAMLGI GGCPSPLGLG AKVPEQPSAI 300 LGIPMDGEKW RQQRILELEV YLRRIDLLQD EVKSALEELK STPPT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK250922 | 0.0 | AK250922.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf98d18, mRNA sequence. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G28040.1 | 2e-41 | DNA-binding storekeeper protein-related transcriptional regulator |