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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_4BS_96AE357C6.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
GeBP |
Protein Properties |
Length: 347aa MW: 38068.7 Da PI: 5.182 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_4BS_96AE357C6.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 107.9 | 7.2e-34 | 66 | 165 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehd 85
lfqrlw+eeDeiv+L+++ +f+a++g+ +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+
Traes_4BS_96AE357C6.1 66 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHE 153
79*************************9977778***************************************8889*********** PP
DUF573 86 qkifelskkiWg 97
q +fe+++ iW+
Traes_4BS_96AE357C6.1 154 QAVFEIARNIWR 165
***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MLPMVDDPSA AGAAASSSFP DADAYGNGDS EDIDFPVDPI PNPPFSSAPV AAPASATATV 60 GERRPLFQRL WTEEDEIVIL RAFAEFTAQR GTAFASHQYD TEPFYEEMRR RLQLDFSKSQ 120 LAEKLRRLKR KYRNCVERLR CSGNTFSFRS PHEQAVFEIA RNIWRPSSDK HGRDPNAADS 180 EDDATITATN AAANGDAKSP SSSKAHRRGR RRRTADLAAD ASEAPQPYTS GPMPVKTEDS 240 LPAFFPHVSM DGAEPVVAPV VNTESSVLTP LFKEMVRAML GIGGCPSPLG LGAKVPEQPS 300 AILGIPMEGE KWRQQRILEL EVYLRRIDLL QDEVKSALEE LKSTPPS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK250922 | 0.0 | AK250922.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf98d18, mRNA sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G28040.1 | 1e-43 | DNA-binding storekeeper protein-related transcriptional regulator |